Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015807044.1_cds_XP_016494657.1_9047
CDS Infomation

[gene=LOC107813861] [db_xref=GeneID:107813861] [protein=putative late blight resistance protein homolog R1A-10 isoform X2] [protein_id=XP_016494657.1] [location=join(5788..8422,9158..9171)] [gbkey=CDS]
Sequence

ATGGCTGCTTATGCTGCTGTAACTTCTCTGATGGGAATAATGCAGCAGCTTCCACAATCC
CGCTTAGACCTTCTGCAGGGTCATAAATTACTTTTGGAATTACTCCACAAGAAGGTTGGC
TCTCTGCTAGAGTTTCTGGACAATTCTGATGATGAACCAATGAAGGATTTGCAGAAAAAG
GTCAAAGATCTAGCAAATAAAGTAGAGGAGCAAGTCGAATCACACATTCAAAGAAAGGCT
CAGAAGACGCTTCTTAAGATGTTGCAACGAGTCTTCCACCTTCCATCAAAGTCCCATGAG
AGACTTTATAAGATCTTGCTACAAGCTATATGTGACGTTGATTCGATCAAGGAAAAGCTC
ATCAAACAGATGAAGAATAACAAATTGCAAGCTGTAAATCATTCAATCGGTGGTTCTAGT
TCACCACGATTGCATGTTTCAACCCTCGTGAACGATATGGTGGGGTACAACATTGAACAA
GAGCGCATGCGGAGTCAACTTACCGGACACTCATCTCAATTGGAAGTCATTTCTATTGTT
GGGATGGGCGGCATAGGTAAGTCAACTTTTGCTAATAAGATGTTTTCTGATCCCTCAATT
TTGAGCTTCTTTGATGTTCGTGGATGGATTACTGTGTCCATGAACTACAGTTTAAGAAAG
ATGCTTCTAACCCTCCTTCAAGACACTGTTGGGGCGGCCAAAGAGCTTGATGAGAAAACC
GATGGAGAGCTAGCAGATCACTTGCAAAAAAGTTTAAAGGGTAGAAGGTATTTGATTGTT
GTGGATGATATGTGGAGTAGGGAAGCCTGGGATGATGTTAGATTATGTTTTCCAGAAAAC
AATAATAGAAGTCGGATATTGTTGACTACTCGAGACATGAAGGTTGCTCAATATGCTAGC
TCTCCTAAGGATCTGTTTCCAATGCGTTTCCTGGAGCCAAAGGAAAGTTGGCATTTGTTT
TGCCAAAAGGTGTTTGGCAAAAAAGATTGTCCAACTGAATATGAGAATGTGGCGAAGGAA
GTTGTAAGTAATTGCAAAGGTTTACCACTAATGATTTCTGTGGTTGCAGGGACTCTGTCT
AGCAAGAAAACAATGGATGAGTGGATCAAAGTAGCTCAAAGTGTGATCTCATCAGTAGAT
CTTGATGATTATCAGCATTGTTCAAGAGTGCTTGGTTTGAGCTACACTCATCTTCCTTCT
TATTTGAAATCTTGCTTTCTTTACTTTGGAGTTTTTCCAAAAGCTAGTGAGATTTCTGTG
AAGAAATTGACTAGATTATGGATTGCCGAAGGACTCTTAGAGCTAAAGGGGTCTGAAGGA
TTGGAACAAGTAGCTGCTAATATTTTACATGTTCTTATTGATAAAAGTCTGGTTGTTGTT
AGCAAGCAAAGTTTGGATGACAAGATCAAGACATGTAGGATTCATGATCTTCTCCATGAT
TTATGCTTGAGAGAAGCTGAAAGCGAGAATCTTTTGTATGTTGCATGCCGAGGATCTACA
AGGGTTTCCTCTCAAGGCCGATGGGTGTCAGTTAATCCAGAGCGAGGTTACGATTCTTAT
GCTCTTTTGGAAAATCTTACTCATAGCAAAATACGTTCTATTCATTTTCATCCCACTGAG
CTGGTGCGGCGTCAATTATCTATTAAACTATTCCATTTTAAACTTCTTAGAGTATTGGAC
TTGGTGGCAATAAGATTAGTTTCATTCCCTATTGGAGTAGTACACCTAGTTTCTTTGAGG
TATTTGGCTGTGGTGGTTAATTTTGAGACTTCTGAACATCAATCAATTTCCAATCTTTGG
AATTTACAAACTTTTATCTTTTCCATAAGTCTTCCACAAATCGATCTCGTGCATTTACCA
AATGGAATTTGGGAAATGTCTCAATTGAAGCATCTCCACTCTACAAGGATGTCTCTATAC
TCTCCTCCAAAGGTATCAGCTAATGAAGTTAAGTACCGCATTTTGGAAAACTTACAAAGT
GTTTCTGGGTTGAGTCCTTGTTGTTGCACAAAAGAAATATTTGAAGGGATTAAAAATGTG
AGAAAATTGGGTATTTCTGGCACTGAAGACGAATTTGATTATGAGCCTATATGCTTAGAT
AATCTAATATATTTACCCGAGCTTGAGGAACTAAAAATTGCATCATACATCCTTACCAGA
TATGATGTACTTCTTAGGCTTCCATTCGCAGGTTCTTTCCCACCTAATCTCAAGAAGCTG
ACACTTCGCAAAACTTTTCTACTGTGGGAGGACATGACGATCATTAGCAAGTTGCCCAAA
CTTGAGGTGCTCCAGTTGAAGGCTGATGCCTTTGTAATTAGTTATCCCACAGATACAGTC
TGGGAAGTAACAGAGATGGGATTTCTTGAATTGAAATTCTTGCTCCTTGAGTGGTTGGAT
CTTGATTACTGGAGAGCCGCTGATGATTATTTCCCATGCCTTGAGCACATAGTTATCAGA
AACTGTCGTACGTTAAAAGAGATTCCTGAAGGATTTGTAGATAGTTTGACACTGCAGCAA
ATTCAGTTACATCGATGTACTTCTTCCCTTGTGACTTTTGCTAAGCAAATCCAAGAAAAT
TACGAGAGTTTGGGGAACAACATGCTTAAAGTTTATTCCTTTGACACAATTCGAGGGAGA
GCTTCTTAG

Peptide Sequence

PEP ID

XP_016494657.1
PEP Infomation

PREDICTED: putative late blight resistance protein homolog R1A-10 isoform X2 [Nicotiana tabacum]
Sequence

MAAYAAVTSLMGIMQQLPQSRLDLLQGHKLLLELLHKKVGSLLEFLDNSDDEPMKDLQKK
VKDLANKVEEQVESHIQRKAQKTLLKMLQRVFHLPSKSHERLYKILLQAICDVDSIKEKL
IKQMKNNKLQAVNHSIGGSSSPRLHVSTLVNDMVGYNIEQERMRSQLTGHSSQLEVISIV
GMGGIGKSTFANKMFSDPSILSFFDVRGWITVSMNYSLRKMLLTLLQDTVGAAKELDEKT
DGELADHLQKSLKGRRYLIVVDDMWSREAWDDVRLCFPENNNRSRILLTTRDMKVAQYAS
SPKDLFPMRFLEPKESWHLFCQKVFGKKDCPTEYENVAKEVVSNCKGLPLMISVVAGTLS
SKKTMDEWIKVAQSVISSVDLDDYQHCSRVLGLSYTHLPSYLKSCFLYFGVFPKASEISV
KKLTRLWIAEGLLELKGSEGLEQVAANILHVLIDKSLVVVSKQSLDDKIKTCRIHDLLHD
LCLREAESENLLYVACRGSTRVSSQGRWVSVNPERGYDSYALLENLTHSKIRSIHFHPTE
LVRRQLSIKLFHFKLLRVLDLVAIRLVSFPIGVVHLVSLRYLAVVVNFETSEHQSISNLW
NLQTFIFSISLPQIDLVHLPNGIWEMSQLKHLHSTRMSLYSPPKVSANEVKYRILENLQS
VSGLSPCCCTKEIFEGIKNVRKLGISGTEDEFDYEPICLDNLIYLPELEELKIASYILTR
YDVLLRLPFAGSFPPNLKKLTLRKTFLLWEDMTIISKLPKLEVLQLKADAFVISYPTDTV
WEVTEMGFLELKFLLLEWLDLDYWRAADDYFPCLEHIVIRNCRTLKEIPEGFVDSLTLQQ
IQLHRCTSSLVTFAKQIQENYESLGNNMLKVYSFDTIRGRAS

Transcript Sequence

Gene sequence data has not been registered.